Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| incf transfer protein trbf | SAMEA3752553_04831 | Not Available | Positive | 4915979 - 4916374 | 15395.0 |
| conjugal transfer protein trah | SAMEA3752553_04832 | Not Available | Positive | 4916358 - 4917734 | 50724.9 |
| conjugative transfer protein | SAMEA3752553_04833 | Not Available | Positive | 4917731 - 4920577 | 103899.0 |
| conjugal transfer entry exclusion protein tras | SAMEA3752553_04834 | Not Available | Positive | 4920574 - 4921083 | 19435.7 |
| conjugal transfer surface exclusion protein trat | SAMEA3752553_04835 | Not Available | Positive | 4921097 - 4921828 | 25932.2 |
| conjugal transfer protein trad | SAMEA3752553_04836 | Not Available | Positive | 4922081 - 4924306 | 84436.8 |
| plasmid maintenance protein | SAMEA3752553_04837 | Not Available | Negative | 4924315 - 4924713 | 14903.1 |
| post-segregational killing toxin | SAMEA3752553_04838 | Not Available | Negative | 4924713 - 4924940 | 8513.01 |
| conjugal transfer nickase/helicase trai | SAMEA3752553_04839 | Not Available | Positive | 4925022 - 4930292 | 191957.0 |
| conjugal transfer pilus acetylation protein trax | SAMEA3752553_04840 | Not Available | Positive | 4930312 - 4931058 | 27161.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





