Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system lipoprotein | SAMEA3752553_04493 | Not Available | Positive | 4586328 - 4586738 | 14696.8 |
| type ii secretion protein gspc | SAMEA3752553_04494 | Not Available | Positive | 4586897 - 4587715 | 29826.9 |
| type ii secretion system protein d | SAMEA3752553_04495 | Not Available | Positive | 4587745 - 4589805 | 74206.1 |
| type ii secretion system protein e | SAMEA3752553_04496 | Not Available | Positive | 4589805 - 4591298 | 55207.8 |
| type ii secretion system protein f | SAMEA3752553_04497 | Not Available | Positive | 4591298 - 4592521 | 44912.6 |
| general secretion pathway protein g precursor (epsg-like) | SAMEA3752553_04498 | Not Available | Positive | 4592538 - 4592993 | 16663.8 |
| type ii secretion system protein h | SAMEA3752553_04499 | Not Available | Positive | 4592997 - 4593560 | 21155.7 |
| type ii secretion system protein i | SAMEA3752553_04500 | Not Available | Positive | 4593557 - 4593928 | 13573.3 |
| type ii secretion protein gspj | SAMEA3752553_04501 | Not Available | Positive | 4593925 - 4594524 | 22193.2 |
| type ii secretion system protein k | SAMEA3752553_04502 | Not Available | Positive | 4594527 - 4595504 | 36602.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





