Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dotu family type iv/vi secretion system protein | SAMEA3752553_04350 | Not Available | Positive | 4412273 - 4412962 | 26013.4 |
| putative ompa family protein | SAMEA3752553_04351 | Not Available | Positive | 4412962 - 4414641 | 61853.9 |
| putative type vi secretion protein | SAMEA3752553_04352 | Not Available | Positive | 4414647 - 4415138 | 18710.0 |
| chaperone clpb | SAMEA3752553_04353 | Not Available | Positive | 4415307 - 4417985 | 98579.9 |
| vgr-related protein | SAMEA3752553_04354 | Not Available | Positive | 4417970 - 4420327 | 87167.4 |
| phage lysin | SAMEA3752553_04355 | Not Available | Positive | 4420343 - 4422571 | 84328.4 |
| uncharacterised protein | SAMEA3752553_04356 | Not Available | Positive | 4422568 - 4423011 | 16497.0 |
| uncharacterised protein | SAMEA3752553_04357 | Not Available | Positive | 4423382 - 4423867 | 17744.4 |
| uncharacterized protein conserved in bacteria | SAMEA3752553_04358 | Not Available | Positive | 4423986 - 4424387 | 15442.8 |
| putative type vi secretion protein | SAMEA3752553_04359 | Not Available | Positive | 4424447 - 4424710 | 8977.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





