Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer mating pair stabilization protein tran | SAMEA3752553_04061 | Not Available | Positive | 4135296 - 4137230 | 69850.5 |
| traf protein | SAMEA3752553_04062 | Not Available | Positive | 4137232 - 4138017 | 29653.3 |
| uncharacterised protein | SAMEA3752553_04063 | Not Available | Positive | 4138053 - 4138385 | 12332.8 |
| uncharacterised protein | SAMEA3752553_04064 | Not Available | Positive | 4138386 - 4138670 | 10349.8 |
| conjugal transfer protein trbb | SAMEA3752553_04065 | Not Available | Positive | 4138672 - 4139259 | 21336.7 |
| conjugal transfer pilus assembly protein trah | SAMEA3752553_04066 | Not Available | Positive | 4139312 - 4140718 | 51811.2 |
| conjugal transfer mating pair stabilization protein trag | SAMEA3752553_04067 | Not Available | Positive | 4140718 - 4143573 | 103808.0 |
| uncharacterised protein | SAMEA3752553_04068 | Not Available | Positive | 4143588 - 4144208 | 22867.0 |
| uncharacterised protein | SAMEA3752553_04069 | Not Available | Positive | 4144270 - 4145061 | 30867.1 |
| putative conjugative transfer protein | SAMEA3752553_04070 | Not Available | Positive | 4145224 - 4145916 | 26059.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





