Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trbi protein | SAMEA3752553_04051 | Not Available | Positive | 4129714 - 4130130 | 14749.9 |
| trar protein | SAMEA3752553_04052 | Not Available | Positive | 4130133 - 4130357 | 8724.54 |
| traw protein | SAMEA3752553_04053 | Not Available | Positive | 4130354 - 4130971 | 22945.6 |
| uncharacterised protein | SAMEA3752553_04054 | Not Available | Positive | 4130968 - 4131363 | 15449.4 |
| conjugal transfer pilus assembly protein trau | SAMEA3752553_04055 | Not Available | Positive | 4131360 - 4132358 | 36823.6 |
| uncharacterised protein | SAMEA3752553_04056 | Not Available | Positive | 4132415 - 4133176 | 29850.7 |
| conjugal transfer protein trap | SAMEA3752553_04057 | Not Available | Positive | 4133216 - 4133791 | 21852.8 |
| putative conjugative transfer protein | SAMEA3752553_04058 | Not Available | Positive | 4133868 - 4134212 | 13126.5 |
| uncharacterised protein | SAMEA3752553_04059 | Not Available | Positive | 4134214 - 4134654 | 17023.4 |
| trbc protein | SAMEA3752553_04060 | Not Available | Positive | 4134682 - 4135299 | 22803.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





