Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chb operon repressor | SAMEA3752553_03481 | Not Available | Positive | 3573267 - 3574106 | 32868.2 |
| 6-phospho-beta-glucosidase | SAMEA3752553_03482 | Not Available | Positive | 3574211 - 3575563 | 50614.4 |
| putative chitobiose-phosphate hydrolase | SAMEA3752553_03483 | Not Available | Positive | 3575576 - 3576334 | 27938.4 |
| uncharacterised protein | SAMEA3752553_03484 | Not Available | Negative | 3576594 - 3577046 | 16242.9 |
| h repeat-containing rhs element protein | SAMEA3752553_03485 | Not Available | Negative | 3577347 - 3577541 | 7498.08 |
| h repeat-associated protein | SAMEA3752553_03486 | Not Available | Negative | 3577628 - 3577984 | 13554.6 |
| type iv secretion protein rhs | SAMEA3752553_03488 | Not Available | Negative | 3578492 - 3578887 | 15348.5 |
| protein rhsd, truncation | SAMEA3752553_03489 | Not Available | Negative | 3578899 - 3580968 | 77899.2 |
| rhsd element protein | SAMEA3752553_03490 | Not Available | Negative | 3580934 - 3583114 | 79720.5 |
| vgrg protein, encoded within repeats that are hotspots for chromosomal duplication formation | SAMEA3752553_03491 | Not Available | Negative | 3583181 - 3585289 | 78776.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





