Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin protein | SAMEA3752553_03251 | Not Available | Negative | 3355336 - 3355878 | 18596.8 |
| nudix-family hydrolase | SAMEA3752553_03252 | Not Available | Positive | 3356157 - 3356582 | 16361.6 |
| phosphoglycerate mutase | SAMEA3752553_03253 | Not Available | Negative | 3356621 - 3357223 | 22320.8 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | SAMEA3752553_03254 | Not Available | Positive | 3357513 - 3358670 | 42249.0 |
| undecaprenyl phosphate 4-deoxy-4-formamido-l-arabinose transferase | SAMEA3752553_03255 | Not Available | Positive | 3358674 - 3359642 | 36341.3 |
| bifunctional polymyxin resistance protein | SAMEA3752553_03256 | Not Available | Positive | 3359642 - 3361624 | 74212.0 |
| putative polysaccharide deacetylase | SAMEA3752553_03257 | Not Available | Positive | 3361621 - 3362511 | 33113.6 |
| undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase | SAMEA3752553_03258 | Not Available | Positive | 3362511 - 3364163 | 62545.9 |
| inner membrane protein | SAMEA3752553_03259 | Not Available | Positive | 3364160 - 3364495 | 12192.7 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | SAMEA3752553_03260 | Not Available | Positive | 3364495 - 3364881 | 14068.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





