Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate:quinone oxidoreductase | SAMEA3752553_03220 | Not Available | Negative | 3308170 - 3309816 | 60248.1 |
| abc transporter atpase/permease | SAMEA3752553_03221 | Not Available | Negative | 3310034 - 3311677 | 61533.4 |
| alpha-ketoglutarate-dependent dioxygenase (alkylated dna repair protein) | SAMEA3752553_03222 | Not Available | Negative | 3311753 - 3312403 | 24031.7 |
| regulatory protein of adaptative response | SAMEA3752553_03223 | Not Available | Negative | 3312403 - 3313467 | 39296.0 |
| thiamine biosynthesis lipoprotein | SAMEA3752553_03224 | Not Available | Negative | 3313541 - 3314596 | 38551.0 |
| outer membrane porin protein c | SAMEA3752553_03225 | Not Available | Negative | 3314708 - 3315832 | 41236.3 |
| two-component system sensor kinase | SAMEA3752553_03227 | Not Available | Positive | 3316571 - 3319243 | 100337.0 |
| transcriptional regulator rcsb | SAMEA3752553_03228 | Not Available | Positive | 3319260 - 3319910 | 23672.0 |
| two-component system sensor kinase | SAMEA3752553_03229 | Not Available | Negative | 3320110 - 3322959 | 106541.0 |
| duf2135 family protein, function uncharacterised | SAMEA3752553_03230 | Not Available | Negative | 3323234 - 3324010 | 28291.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





