Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter atp-binding protein (cytochrome c-type biogenesis protein) | SAMEA3752553_03210 | Not Available | Negative | 3300648 - 3301265 | 22866.4 |
| cytochrome c-type protein | SAMEA3752553_03211 | Not Available | Negative | 3301284 - 3301886 | 23101.8 |
| citrate reductase cytochrome c-type subunit | SAMEA3752553_03212 | Not Available | Negative | 3301896 - 3302345 | 16311.5 |
| ferredoxin-type protein naph | SAMEA3752553_03213 | Not Available | Negative | 3302342 - 3303205 | 31875.3 |
| ferredoxin-type protein | SAMEA3752553_03214 | Not Available | Negative | 3303192 - 3303887 | 24926.1 |
| periplasmic nitrate reductase | SAMEA3752553_03215 | Not Available | Negative | 3303894 - 3306380 | 93061.0 |
| napd protein | SAMEA3752553_03216 | Not Available | Negative | 3306377 - 3306640 | 9469.03 |
| ferredoxin-type protein | SAMEA3752553_03217 | Not Available | Negative | 3306630 - 3307124 | 18048.3 |
| uncharacterised protein | SAMEA3752553_03218 | Not Available | Positive | 3307233 - 3307397 | 6191.65 |
| ecotin | SAMEA3752553_03219 | Not Available | Positive | 3307533 - 3308021 | 18166.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





