Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate dehydrogenase | SAMEA3752553_03039 | Not Available | Negative | 3150520 - 3151995 | 55707.5 |
| uncharacterised protein | SAMEA3752553_03040 | Not Available | Negative | 3152161 - 3152310 | 5714.39 |
| putative hex-regulon repressor (rpir-family transcriptional regulator) | SAMEA3752553_03041 | Not Available | Positive | 3152333 - 3153202 | 31993.4 |
| pyruvate kinase | SAMEA3752553_03042 | Not Available | Positive | 3153330 - 3154772 | 51388.3 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | SAMEA3752553_03043 | Not Available | Negative | 3154904 - 3155875 | 37412.5 |
| putative peptidoglycan-binding peptidase | SAMEA3752553_03044 | Not Available | Negative | 3155995 - 3157317 | 49060.6 |
| high-affinity zinc transporter periplasmic protein | SAMEA3752553_03045 | Not Available | Negative | 3157333 - 3158319 | 35977.2 |
| high-affinity zinc transporter atpase | SAMEA3752553_03046 | Not Available | Positive | 3158344 - 3159099 | 27869.3 |
| high-affinity zinc uptake system membrane protein | SAMEA3752553_03047 | Not Available | Positive | 3159096 - 3159881 | 27762.5 |
| holliday junction atp-dependent dna helicase | SAMEA3752553_03048 | Not Available | Negative | 3160028 - 3161038 | 37176.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





