Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate dioxygenase alpha subunit | SAMEA3752553_02313 | Not Available | Positive | 2359344 - 2360705 | 51111.8 |
| 3-phenylpropionate dioxygenase beta subunit | SAMEA3752553_02314 | Not Available | Positive | 2360702 - 2361220 | 20580.3 |
| 3-phenylpropionate dioxygenase ferredoxin subunit | SAMEA3752553_02315 | Not Available | Positive | 2361220 - 2361540 | 11329.3 |
| 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase | SAMEA3752553_02316 | Not Available | Positive | 2361537 - 2362349 | 28471.3 |
| 3-phenylpropionate dioxygenase ferredoxin--nad(+) reductase component | SAMEA3752553_02317 | Not Available | Positive | 2362359 - 2363561 | 43966.8 |
| inner membrane protein | SAMEA3752553_02318 | Not Available | Positive | 2363658 - 2364080 | 15212.3 |
| putative aldose 1-epimerase | SAMEA3752553_02319 | Not Available | Negative | 2364128 - 2365000 | 32718.1 |
| putative zinc-binding dehydrogenase | SAMEA3752553_02320 | Not Available | Negative | 2365012 - 2366073 | 38052.1 |
| abc transporter permease | SAMEA3752553_02321 | Not Available | Negative | 2366139 - 2367137 | 34475.6 |
| putative abc transporter atp-binding protein | SAMEA3752553_02322 | Not Available | Negative | 2367162 - 2368673 | 55035.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





