Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 2219542 - 2219617 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 2219622 - 2219697 | Not Available |
| dna-binding transcriptional activator xapr | SAMEA3752553_02182 | Not Available | Negative | 2219806 - 2220690 | 33629.4 |
| xanthosine permease | SAMEA3752553_02183 | Not Available | Negative | 2220942 - 2222198 | 46111.5 |
| purine nucleoside phosphorylase | SAMEA3752553_02184 | Not Available | Negative | 2222258 - 2223091 | 29836.4 |
| nucleoside-specific channel-forming protein tsx | SAMEA3752553_02185 | Not Available | Positive | 2223340 - 2224104 | 29231.6 |
| lysr family transcriptional regulator | SAMEA3752553_02186 | Not Available | Negative | 2224143 - 2225069 | 33921.1 |
| sodium/bile acid symporter family (mazg-like) | SAMEA3752553_02187 | Not Available | Positive | 2225159 - 2226157 | 36377.8 |
| protein | SAMEA3752553_02188 | Not Available | Negative | 2226154 - 2226372 | 8415.57 |
| dna ligase | SAMEA3752553_02189 | Not Available | Negative | 2226374 - 2228389 | 73668.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





