Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | SAMEA3752553_02110 | Not Available | Negative | 2141985 - 2143142 | 41149.1 |
| abc transporter substrate-binding protein | SAMEA3752553_02111 | Not Available | Negative | 2143149 - 2144066 | 32553.0 |
| periplasmic beta-glucosidase | SAMEA3752553_02112 | Not Available | Negative | 2144277 - 2146544 | 82481.4 |
| d-lactate dehydrogenase | SAMEA3752553_02113 | Not Available | Positive | 2146770 - 2148485 | 64680.0 |
| penicillin-binding protein 7 | SAMEA3752553_02114 | Not Available | Negative | 2148523 - 2149455 | 33855.3 |
| inner membrane protein | SAMEA3752553_02115 | Not Available | Negative | 2149629 - 2150216 | 21692.0 |
| deda family membrane protein | SAMEA3752553_02116 | Not Available | Positive | 2150386 - 2150964 | 21445.9 |
| putative short-chain dehydrogenase | SAMEA3752553_02117 | Not Available | Negative | 2151094 - 2151855 | 26983.4 |
| multidrug resistance outer membrane protein mdtq | SAMEA3752553_02118 | Not Available | Negative | 2151908 - 2153344 | 52184.0 |
| pp_02016 | SAMEA3752553_02119 | Not Available | Negative | 2154039 - 2154989 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





