Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3752553_01770 | Not Available | Positive | 1808344 - 1808529 | 7043.69 |
| transposase, is4 family protein | SAMEA3752553_01771 | Not Available | Positive | 1808650 - 1809240 | 22205.9 |
| thymidine kinase | SAMEA3752553_01772 | Not Available | Negative | 1809522 - 1810139 | 23400.8 |
| h-ns histone family protein | SAMEA3752553_01773 | Not Available | Positive | 1810744 - 1811157 | 15540.5 |
| utp--glucose-1-phosphate uridylyltransferase | SAMEA3752553_01774 | Not Available | Negative | 1811301 - 1812209 | 32944.2 |
| orphan two-component response regulator | SAMEA3752553_01775 | Not Available | Negative | 1812411 - 1813424 | 37304.5 |
| patatin | SAMEA3752553_01776 | Not Available | Negative | 1813516 - 1814460 | 34357.6 |
| sec-c motif domain-containing protein | SAMEA3752553_01777 | Not Available | Positive | 1814534 - 1814992 | 16991.2 |
| formyltetrahydrofolate deformylase | SAMEA3752553_01778 | Not Available | Positive | 1815042 - 1815884 | 31922.6 |
| Trna-tyr | Not Available | Not Available | Positive | 1816044 - 1816128 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





