Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 564706 - 564718 | Not Available |
| Hypothetical protein | SAMEA3752553_00523 | Not Available | Positive | 567532 - 568278 | 27250.5 |
| gntr family transcriptional regulator | SAMEA3752553_00524 | Not Available | Positive | 568367 - 569053 | 26566.7 |
| Putative selenium-binding protein ydfz | SAMEA3752553_00525 | Not Available | Positive | 569231 - 569434 | 7276.83 |
| putative sugar dehydrogenase | SAMEA3752553_00526 | Not Available | Negative | 569470 - 570930 | 53619.2 |
| Gp59 | SAMEA3752553_00527 | Not Available | Negative | 571019 - 572302 | 46269.9 |
| Hypothetical protein | SAMEA3752553_00528 | Not Available | Positive | 573089 - 573322 | 8778.78 |
| Recombinase family protein | SAMEA3752553_00529 | Not Available | Positive | 573639 - 574229 | 21909.8 |
| Qin prophage | SAMEA3752553_00531 | Not Available | Negative | 574902 - 577973 | 103124.0 |
| Putative lom-like outer membrane protein | SAMEA3752553_00532 | Not Available | Negative | 578038 - 578637 | 21591.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





