Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peripheral inner membrane phage-shock protein | SAMEA3752553_01698 | Not Available | Negative | 1737414 - 1737635 | 8042.22 |
| phage shock protein c | SAMEA3752553_01699 | Not Available | Negative | 1737644 - 1738003 | 13489.6 |
| phage shock protein b | SAMEA3752553_01700 | Not Available | Negative | 1738003 - 1738227 | 8763.59 |
| phage shock protein a | SAMEA3752553_01701 | Not Available | Negative | 1738281 - 1738949 | 25494.4 |
| phage shock protein operon transcriptional activator | SAMEA3752553_01702 | Not Available | Positive | 1739116 - 1740093 | 36962.6 |
| 4-aminobutyrate aminotransferase | SAMEA3752553_01703 | Not Available | Negative | 1740213 - 1741478 | 44730.7 |
| gamma-glutamylputrescine oxidoreductase | SAMEA3752553_01704 | Not Available | Negative | 1741516 - 1742796 | 47185.3 |
| gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase | SAMEA3752553_01705 | Not Available | Negative | 1742798 - 1744285 | 53409.5 |
| transcriptional regulator of the polyamine metabolism genes | SAMEA3752553_01706 | Not Available | Negative | 1744435 - 1744992 | 20092.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | SAMEA3752553_01707 | Not Available | Negative | 1745019 - 1745783 | 28014.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





