Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fad binding molybdopterin dehydrogenase | SAMEA3752553_01625 | Not Available | Positive | 1658817 - 1659596 | 28723.3 |
| selenate reductase subunit ygfn | SAMEA3752553_01626 | Not Available | Positive | 1659593 - 1662463 | 103500.0 |
| putative purine permease | SAMEA3752553_01627 | Not Available | Positive | 1662628 - 1664028 | 49088.4 |
| guanine deaminase | SAMEA3752553_01628 | Not Available | Positive | 1664046 - 1665362 | 50191.8 |
| putative permease | SAMEA3752553_01629 | Not Available | Positive | 1665398 - 1666765 | 46761.0 |
| electron transport protein ygfs | SAMEA3752553_01630 | Not Available | Negative | 1666801 - 1667289 | 17514.3 |
| oxidoreductase fe-s binding subunit | SAMEA3752553_01631 | Not Available | Negative | 1667289 - 1669208 | 69135.9 |
| purine permease ygfu | SAMEA3752553_01632 | Not Available | Positive | 1669644 - 1671092 | 51761.4 |
| small predicted membrane protein | SAMEA3752553_01633 | Not Available | Positive | 1671094 - 1671219 | 4791.29 |
| isopentenyl-diphosphate delta-isomerase | SAMEA3752553_01634 | Not Available | Positive | 1671342 - 1671890 | 20374.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





