Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system protein | SAMEA3752553_01605 | Not Available | Negative | 1633863 - 1634528 | 24526.4 |
| yscq/hrcq family type iii secretion apparatus protein | SAMEA3752553_01606 | Not Available | Negative | 1634518 - 1634859 | 13102.3 |
| type iii secretion system protein spao | SAMEA3752553_01607 | Not Available | Negative | 1635100 - 1635465 | 13667.5 |
| protein | SAMEA3752553_01608 | Not Available | Negative | 1635597 - 1637207 | 60429.6 |
| Trna-gly | Not Available | Not Available | Positive | 1637441 - 1637514 | Not Available |
| lipoprotein yger | SAMEA3752553_01610 | Not Available | Negative | 1637593 - 1638348 | 26540.0 |
| xanthine dehydrogenase subunit xdha | SAMEA3752553_01611 | Not Available | Positive | 1638763 - 1641060 | 82663.0 |
| xanthine dehydrogenase fad-binding subunit | SAMEA3752553_01612 | Not Available | Positive | 1641071 - 1641949 | 31558.6 |
| xanthine dehydrogenase iron-sulfur-binding subunit | SAMEA3752553_01613 | Not Available | Positive | 1641946 - 1642425 | 16937.7 |
| transcriptional regulator | SAMEA3752553_01614 | Not Available | Negative | 1642465 - 1644243 | 66073.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





