Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase nickel incorporation protein | SAMEA3752553_01450 | Not Available | Positive | 1478878 - 1479228 | 13168.9 |
| hydrogenase isoenzymes nickel incorporation protein | SAMEA3752553_01451 | Not Available | Positive | 1479232 - 1480104 | 31566.8 |
| hydrogenase isoenzymes formation protein | SAMEA3752553_01452 | Not Available | Positive | 1480095 - 1480367 | 9732.58 |
| hydrogenase isoenzymes formation protein | SAMEA3752553_01453 | Not Available | Positive | 1480367 - 1481488 | 41366.7 |
| hydrogenase isoenzymes formation protein | SAMEA3752553_01454 | Not Available | Positive | 1481485 - 1482495 | 35080.6 |
| formate hydrogenlyase transcriptional activator | SAMEA3752553_01455 | Not Available | Positive | 1482569 - 1484647 | 78443.5 |
| protein | SAMEA3752553_01456 | Not Available | Negative | 1484684 - 1485037 | 13960.3 |
| uncharacterised protein | SAMEA3752553_01457 | Not Available | Negative | 1485069 - 1485248 | 6742.79 |
| dna mismatch repair protein muts | SAMEA3752553_01458 | Not Available | Positive | 1485324 - 1487885 | 95324.6 |
| serine/threonine-specific protein phosphatase 2 | SAMEA3752553_01459 | Not Available | Positive | 1487991 - 1488647 | 25146.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





