Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-2 component protein | SAMEA3752553_01378 | Not Available | Positive | 1411455 - 1411703 | 8808.67 |
| transposase | SAMEA3752553_01379 | Not Available | Negative | 1413958 - 1414257 | 11543.8 |
| alpha amylase | SAMEA3752553_01380 | Not Available | Positive | 1414423 - 1414824 | 15548.7 |
| protein csid | SAMEA3752553_01381 | Not Available | Positive | 1415767 - 1416744 | 37386.6 |
| hydroxyglutarate oxidase | SAMEA3752553_01382 | Not Available | Positive | 1416764 - 1418032 | 46113.7 |
| succinate-semialdehyde dehydrogenase | SAMEA3752553_01383 | Not Available | Positive | 1418055 - 1419503 | 51788.1 |
| 4-aminobutyrate aminotransferase | SAMEA3752553_01384 | Not Available | Positive | 1419517 - 1420797 | 45663.3 |
| gamma-aminobutyrate transporter | SAMEA3752553_01385 | Not Available | Positive | 1421108 - 1422508 | 51097.1 |
| gntr family transcriptional regulator | SAMEA3752553_01386 | Not Available | Positive | 1422529 - 1423191 | 24992.3 |
| putative peptidoglycan-binding protein | SAMEA3752553_01387 | Not Available | Negative | 1423192 - 1423641 | 16036.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





