Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aldo/keto reductase | SAMEA3752553_01368 | Not Available | Negative | 1402479 - 1403519 | 38856.4 |
| hydrolase | SAMEA3752553_01369 | Not Available | Positive | 1403676 - 1404563 | 32554.6 |
| protein | SAMEA3752553_01370 | Not Available | Positive | 1404682 - 1404969 | 10946.1 |
| hydrogenase-2 small chain | SAMEA3752553_01371 | Not Available | Positive | 1405158 - 1406276 | 39654.3 |
| hydrogenase-2 subunit | SAMEA3752553_01372 | Not Available | Positive | 1406279 - 1407265 | 36005.0 |
| ni/fe-hydrogenase 2 b-type cytochrome subunit | SAMEA3752553_01373 | Not Available | Positive | 1407255 - 1408433 | 43604.7 |
| hydrogenase-2 large subunit | SAMEA3752553_01374 | Not Available | Positive | 1408430 - 1410133 | 62494.6 |
| hydrogenase 2 maturation protease | SAMEA3752553_01375 | Not Available | Positive | 1410133 - 1410627 | 17724.8 |
| hydrogenase-2 component protein | SAMEA3752553_01376 | Not Available | Positive | 1410620 - 1411108 | 17964.7 |
| hydrogenase nickel incorporation protein hybf | SAMEA3752553_01377 | Not Available | Positive | 1411101 - 1411442 | 12698.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





