Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf3828) | SAMEA3752553_01358 | Not Available | Negative | 1392840 - 1393766 | 34970.0 |
| 2,5-diketo-d-gluconic acid reductase a | SAMEA3752553_01359 | Not Available | Negative | 1393966 - 1394793 | 31111.4 |
| putative alcohol dehydrogenase | SAMEA3752553_01360 | Not Available | Negative | 1394898 - 1396061 | 42113.5 |
| transcriptional regulator yqhc | SAMEA3752553_01361 | Not Available | Positive | 1396198 - 1397154 | 36030.0 |
| inner membrane protein | SAMEA3752553_01362 | Not Available | Negative | 1397194 - 1397853 | 24135.3 |
| cystathionine beta-lyase | SAMEA3752553_01363 | Not Available | Negative | 1397993 - 1399180 | 43145.7 |
| biopolymer transport protein | SAMEA3752553_01364 | Not Available | Positive | 1399432 - 1400166 | 26289.0 |
| biopolymer transport protein | SAMEA3752553_01365 | Not Available | Positive | 1400173 - 1400598 | 15527.9 |
| oxidoreductase | SAMEA3752553_01366 | Not Available | Negative | 1400870 - 1401754 | 31519.8 |
| inner membrane protein | SAMEA3752553_01367 | Not Available | Positive | 1401945 - 1402439 | 18642.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





