Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyglucarate aldolase | SAMEA3752553_01233 | Not Available | Positive | 1266146 - 1266916 | 27400.6 |
| tartronate semialdehyde reductase | SAMEA3752553_01234 | Not Available | Positive | 1266946 - 1267836 | 30661.6 |
| glycerate kinase | SAMEA3752553_01235 | Not Available | Positive | 1267933 - 1269078 | 39136.7 |
| integrase | SAMEA3752553_01237 | Not Available | Positive | 1269711 - 1271171 | 55732.8 |
| protein of uncharacterised function (duf3296) | SAMEA3752553_01238 | Not Available | Positive | 1271499 - 1272224 | 27546.0 |
| uncharacterised protein | SAMEA3752553_01239 | Not Available | Positive | 1272745 - 1273029 | 11434.5 |
| uncharacterised protein | SAMEA3752553_01240 | Not Available | Positive | 1273127 - 1273801 | 24127.6 |
| serine site-specific recombinase | SAMEA3752553_01241 | Not Available | Negative | 1274112 - 1274690 | 21438.1 |
| flagellin protein flic | SAMEA3752553_01242 | Not Available | Positive | 1275129 - 1276382 | 43782.9 |
| transcriptional regulator | SAMEA3752553_01243 | Not Available | Positive | 1276463 - 1276987 | 19655.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





