Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein trka | SAMEA3752553_01066 | Not Available | Negative | 1103000 - 1104376 | 50370.8 |
| ribosomal rna small subunit methyltransferase b | SAMEA3752553_01067 | Not Available | Negative | 1104398 - 1105687 | 48322.2 |
| methionyl-trna formyltransferase | SAMEA3752553_01068 | Not Available | Negative | 1105733 - 1106680 | 34170.4 |
| polypeptide deformylase | SAMEA3752553_01069 | Not Available | Negative | 1106695 - 1107204 | 19329.6 |
| dna protecting protein dpra | SAMEA3752553_01070 | Not Available | Positive | 1107334 - 1108458 | 40957.3 |
| protein smg | SAMEA3752553_01071 | Not Available | Positive | 1108430 - 1108903 | 18497.2 |
| putative dna topoisomerase | SAMEA3752553_01072 | Not Available | Positive | 1108932 - 1109474 | 19845.9 |
| ribosome maturation factor | SAMEA3752553_01073 | Not Available | Positive | 1109479 - 1110051 | 20641.7 |
| shikimate dehydrogenase | SAMEA3752553_01074 | Not Available | Positive | 1110056 - 1110874 | 29465.4 |
| transcriptional regulator | SAMEA3752553_01075 | Not Available | Positive | 1110871 - 1111128 | 10007.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





