Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hicb family protein | SAMEA3752553_00884 | Not Available | Positive | 930841 - 931200 | 13403.0 |
| nickel responsive regulator | SAMEA3752553_00885 | Not Available | Negative | 931320 - 931721 | 15094.7 |
| nickel abc transporter, atp-binding protein | SAMEA3752553_00886 | Not Available | Negative | 931727 - 932533 | 29700.5 |
| nickel abc transporter, atp-binding protein | SAMEA3752553_00887 | Not Available | Negative | 932530 - 933294 | 26835.1 |
| nickel abc transporter, permease protein | SAMEA3752553_00888 | Not Available | Negative | 933294 - 934127 | 30393.9 |
| nickel abc-transporter, permease protein | SAMEA3752553_00889 | Not Available | Negative | 934124 - 935068 | 35250.3 |
| nickel abc transporter, substrate-binding protein | SAMEA3752553_00890 | Not Available | Negative | 935068 - 936642 | 58791.3 |
| 4'-phosphopantetheinyl transferase | SAMEA3752553_00891 | Not Available | Negative | 936753 - 937340 | 21738.9 |
| inner membrane protein | SAMEA3752553_00892 | Not Available | Negative | 937395 - 938444 | 38568.9 |
| major facilitator superfamily protein | SAMEA3752553_00893 | Not Available | Positive | 938534 - 939793 | 43812.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





