Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative endo-beta-n-acetylglucosaminidase | SAMEA3752553_00788 | Not Available | Positive | 819837 - 820661 | 30867.3 |
| dna-binding transcriptional activator | SAMEA3752553_00789 | Not Available | Negative | 820857 - 822035 | 44871.7 |
| xylose transport system permease xylh | SAMEA3752553_00790 | Not Available | Negative | 822113 - 823294 | 41033.5 |
| d-xylose transport atp-binding protein xylg | SAMEA3752553_00791 | Not Available | Negative | 823272 - 824813 | 56518.0 |
| d-xylose transporter subunit xylf | SAMEA3752553_00792 | Not Available | Negative | 824891 - 825883 | 35722.1 |
| d-xylose isomerase | SAMEA3752553_00793 | Not Available | Positive | 826249 - 827571 | 49721.7 |
| xylulose kinase | SAMEA3752553_00794 | Not Available | Positive | 827643 - 829097 | 52681.4 |
| inner membrane protein | SAMEA3752553_00795 | Not Available | Positive | 829266 - 829607 | 12553.0 |
| inner membrane protein yiaa | SAMEA3752553_00796 | Not Available | Positive | 829653 - 830090 | 16123.6 |
| putative membrane-associated acyltransferase | SAMEA3752553_00797 | Not Available | Negative | 830132 - 831127 | 37600.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





