Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-xylulose/3-keto-l-gulonate kinase | SAMEA3752553_00778 | Not Available | Negative | 808433 - 809929 | 55275.2 |
| 2,3-diketo-l-gulonate trap transporter, substrate-binding periplasmic protein | SAMEA3752553_00779 | Not Available | Negative | 809933 - 810919 | 36003.1 |
| 2,3-diketo-l-gulonate trap transporter, large permease protein | SAMEA3752553_00780 | Not Available | Negative | 810932 - 812209 | 45371.0 |
| 2,3-diketo-l-gulonate trap transporter, small permease protein | SAMEA3752553_00781 | Not Available | Negative | 812212 - 812685 | 17516.9 |
| beta-galactosidase | SAMEA3752553_00782 | Not Available | Negative | 812803 - 813270 | 17519.0 |
| 2,3-diketo-l-gulonate reductase | SAMEA3752553_00783 | Not Available | Negative | 813282 - 814280 | 36588.9 |
| dna-binding transcriptional repressor | SAMEA3752553_00784 | Not Available | Positive | 814481 - 815329 | 31109.5 |
| electron transport protein ysaa | SAMEA3752553_00785 | Not Available | Positive | 815431 - 815904 | 17421.1 |
| class i and ii aminotransferase | SAMEA3752553_00786 | Not Available | Negative | 816056 - 817309 | 46715.9 |
| alpha-amylase | SAMEA3752553_00787 | Not Available | Negative | 817487 - 819517 | 75719.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





