Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12 abc transporter, atp-binding protein | SAMEA3752553_00736 | Not Available | Negative | 769437 - 770186 | 27113.0 |
| vitamin b12 transport periplasmic protein (putative glutathione peroxidase) | SAMEA3752553_00737 | Not Available | Negative | 770186 - 770737 | 20426.5 |
| vitamin b12 abc transporter, permease protein | SAMEA3752553_00738 | Not Available | Negative | 770800 - 771780 | 34937.5 |
| phenylalanyl-trna synthetase subunit beta | SAMEA3752553_00740 | Not Available | Negative | 772185 - 774572 | 87384.2 |
| phenylalanyl-trna synthetase subunit alpha | SAMEA3752553_00741 | Not Available | Negative | 774587 - 775570 | 36833.9 |
| 50s ribosomal protein l20 | SAMEA3752553_00743 | Not Available | Negative | 776020 - 776376 | 13497.7 |
| 50s ribosomal subunit protein l35 | SAMEA3752553_00744 | Not Available | Negative | 776429 - 776626 | 7289.38 |
| translation initiation factor if-3 | SAMEA3752553_00745 | Not Available | Negative | 776723 - 777157 | 16638.4 |
| threonine trna synthetase | SAMEA3752553_00746 | Not Available | Negative | 777269 - 779197 | 74004.4 |
| putative type iii effector protein (ankyrin repeat protein b) | SAMEA3752553_00747 | Not Available | Positive | 779721 - 780836 | 41871.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





