Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity zinc transporter periplasmic protein | SAMEA3752372_00449 | Not Available | Positive | 425062 - 426048 | 36030.3 |
| putative peptidoglycan-binding peptidase | SAMEA3752372_00450 | Not Available | Positive | 426064 - 427386 | 49060.6 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | SAMEA3752372_00451 | Not Available | Positive | 427506 - 428477 | 37412.5 |
| pyruvate kinase | SAMEA3752372_00452 | Not Available | Negative | 428609 - 430051 | 51360.3 |
| putative hex-regulon repressor (rpir-family transcriptional regulator) | SAMEA3752372_00453 | Not Available | Negative | 430179 - 431048 | 31971.4 |
| uncharacterised protein | SAMEA3752372_00454 | Not Available | Positive | 431071 - 431220 | 5714.39 |
| glucose-6-phosphate dehydrogenase | SAMEA3752372_00455 | Not Available | Positive | 431386 - 432861 | 55707.5 |
| phosphogluconate dehydratase | SAMEA3752372_00456 | Not Available | Positive | 433096 - 434907 | 64642.9 |
| khg/kdpg aldolase | SAMEA3752372_00457 | Not Available | Positive | 434944 - 435585 | 22285.3 |
| phosphoribosylglycinamide formyltransferase 2 | SAMEA3752372_00458 | Not Available | Negative | 435641 - 436819 | 42414.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





