Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator arac | SAMEA3752372_00184 | Not Available | Positive | 192674 - 193552 | 33385.8 |
| deda family integral membrane protein | SAMEA3752372_00185 | Not Available | Positive | 193638 - 194402 | 28145.7 |
| thiamine transporter atp-binding subunit | SAMEA3752372_00186 | Not Available | Negative | 194484 - 195182 | 25041.7 |
| thiamine abc transport system, permease protein | SAMEA3752372_00187 | Not Available | Negative | 195166 - 196776 | 59362.6 |
| thiamine transporter substrate binding subunit | SAMEA3752372_00188 | Not Available | Negative | 196752 - 197735 | 36165.2 |
| putative type iii effector protein | SAMEA3752372_00190 | Not Available | Positive | 198106 - 198675 | 21490.2 |
| putative substrate-binding protein | SAMEA3752372_00191 | Not Available | Negative | 198905 - 200563 | 64166.8 |
| 3-isopropylmalate dehydratase small subunit | SAMEA3752372_00193 | Not Available | Negative | 200891 - 201496 | 22662.8 |
| 3-isopropylmalate dehydratase large subunit | SAMEA3752372_00194 | Not Available | Negative | 201507 - 202907 | 49884.7 |
| 3-isopropylmalate dehydrogenase | SAMEA3752372_00195 | Not Available | Negative | 202910 - 204001 | 39502.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





