Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecoki restriction-modification system protein hsds | SAMEA3752372_00005 | Not Available | Negative | 8723 - 10093 | 50606.8 |
| type i restriction enzyme stysji m protein | SAMEA3752372_00006 | Not Available | Negative | 10090 - 11679 | 59276.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 14255 - 14369 | Not Available |
| type i restriction enzyme ecoki subunit r | SAMEA3752372_00007 | Not Available | Negative | 11880 - 15392 | 134124.0 |
| methylated adenine and cytosine restriction protein | SAMEA3752372_00008 | Not Available | Positive | 15580 - 16494 | 33565.8 |
| gtp-binding protein yjia | SAMEA3752372_00009 | Not Available | Negative | 16540 - 17496 | 35653.8 |
| yjix protein | SAMEA3752372_00010 | Not Available | Negative | 17507 - 17710 | 7729.24 |
| putative carbon starvation protein | SAMEA3752372_00011 | Not Available | Negative | 17760 - 19910 | 77314.5 |
| methyl-accepting chemotaxis protein i | SAMEA3752372_00012 | Not Available | Positive | 20287 - 21951 | 59813.9 |
| major facilitator superfamily protein | SAMEA3752372_00013 | Not Available | Negative | 22000 - 23361 | 49436.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





