Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catecholate siderophore tonb-dependent receptor | SAMEA3752372_05781 | Not Available | Positive | 5768400 - 5770382 | 71304.0 |
| hydroxylase | SAMEA3752372_05782 | Not Available | Positive | 5770427 - 5771101 | 25399.0 |
| putative zinc ion binding protein | SAMEA3752372_05783 | Not Available | Positive | 5771175 - 5771441 | 9834.45 |
| protein | SAMEA3752372_05784 | Not Available | Positive | 5771706 - 5771966 | 8568.2 |
| putative dehydrogenase | SAMEA3752372_05785 | Not Available | Negative | 5772106 - 5773191 | 38915.4 |
| putative glycosyl transferase | SAMEA3752372_05786 | Not Available | Negative | 5773332 - 5774294 | 34974.6 |
| atp-dependent dna helicase ding | SAMEA3752372_05787 | Not Available | Negative | 5774322 - 5776472 | 81455.9 |
| putative toxin | SAMEA3752372_05788 | Not Available | Negative | 5776756 - 5778177 | 54665.2 |
| exonuclease | SAMEA3752372_05797 | Not Available | Negative | 5788212 - 5789516 | 48247.3 |
| uncharacterised protein | SAMEA3752372_05798 | Not Available | Negative | 5789547 - 5789867 | 12230.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





