Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | SAMEA3752372_05741 | Not Available | Positive | 5726865 - 5727557 | 26135.6 |
| major facilitator superfamily protein | SAMEA3752372_05742 | Not Available | Positive | 5727580 - 5729007 | 51464.9 |
| ribose operon repressor | SAMEA3752372_05743 | Not Available | Negative | 5728973 - 5729965 | 36614.1 |
| ribokinase | SAMEA3752372_05744 | Not Available | Negative | 5729969 - 5730898 | 32259.3 |
| d-ribose transporter subunit rbsb | SAMEA3752372_05745 | Not Available | Negative | 5731024 - 5731914 | 30940.2 |
| high-affinity ribose transport system permease protein rbsc | SAMEA3752372_05746 | Not Available | Negative | 5731939 - 5732904 | 33454.0 |
| high affinity ribose transport atp-binding protein rbsa | SAMEA3752372_05747 | Not Available | Negative | 5732909 - 5734414 | 55045.0 |
| d-ribose high-affinity transporter | SAMEA3752372_05748 | Not Available | Negative | 5734422 - 5734841 | 15293.4 |
| kup system potassium uptake protein | SAMEA3752372_05749 | Not Available | Negative | 5735008 - 5736876 | 69298.3 |
| thiol peroxidase | SAMEA3752372_05750 | Not Available | Positive | 5737284 - 5737790 | 18508.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





