Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe(2+)-trafficking protein | SAMEA3752372_05706 | Not Available | Positive | 5694518 - 5694793 | 10953.2 |
| membrane-bound lytic murein transglycosylase c | SAMEA3752372_05707 | Not Available | Positive | 5694858 - 5695937 | 40118.8 |
| nucleoside permease | SAMEA3752372_05708 | Not Available | Positive | 5696139 - 5697395 | 46377.9 |
| ornithine decarboxylase | SAMEA3752372_05709 | Not Available | Negative | 5697445 - 5699580 | 79451.6 |
| membrane protein yqga | SAMEA3752372_05710 | Not Available | Positive | 5699978 - 5700685 | 24615.5 |
| Trna-phe | Not Available | Not Available | Positive | 5700791 - 5700866 | Not Available |
| phage integrase | SAMEA3752372_05712 | Not Available | Negative | 5701058 - 5702050 | 38926.1 |
| uncharacterised protein | SAMEA3752372_05713 | Not Available | Negative | 5702468 - 5702860 | 14377.6 |
| uncharacterised protein | SAMEA3752372_05728 | Not Available | Positive | 5714045 - 5714578 | 19669.4 |
| exonuclease iii | SAMEA3752372_05729 | Not Available | Negative | 5714966 - 5715772 | 30942.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





