Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | SAMEA3752372_05665 | Not Available | Negative | 5646169 - 5646840 | 25018.1 |
| atp-dependent rna helicase rhle | SAMEA3752372_05666 | Not Available | Positive | 5647069 - 5648430 | 49977.4 |
| uncharacterised protein | SAMEA3752372_05667 | Not Available | Negative | 5648535 - 5650220 | 65343.9 |
| putative type iii effector protein (leucine rich repeat protein) | SAMEA3752372_05668 | Not Available | Positive | 5651534 - 5652793 | 47667.8 |
| putative type iii effector protein (leucine rich repeat protein) | SAMEA3752372_05669 | Not Available | Positive | 5652855 - 5653598 | 28374.7 |
| putative type iii effector protein (leucine rich repeat protein) | SAMEA3752372_05670 | Not Available | Positive | 5653772 - 5654110 | 13068.3 |
| nitrite extrusion protein 2 | SAMEA3752372_05671 | Not Available | Positive | 5654422 - 5655810 | 49883.1 |
| respiratory nitrate reductase 2 alpha chain | SAMEA3752372_05672 | Not Available | Positive | 5655905 - 5659645 | 140108.0 |
| respiratory nitrate reductase 2 subunit beta | SAMEA3752372_05673 | Not Available | Positive | 5659642 - 5661186 | 58548.1 |
| respiratory nitrate reductase 2 subunit delta | SAMEA3752372_05674 | Not Available | Positive | 5661186 - 5661881 | 26215.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





