Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type vi secretion protein | SAMEA3752372_05644 | Not Available | Positive | 5627345 - 5628391 | 38681.0 |
| Trna-asp | Not Available | Not Available | Positive | 5628523 - 5628599 | Not Available |
| dna polymerase iii subunit epsilon | SAMEA3752372_05646 | Not Available | Negative | 5628732 - 5629472 | 27508.0 |
| ribonuclease h | SAMEA3752372_05647 | Not Available | Positive | 5629528 - 5629995 | 17597.9 |
| s-adenosyl-l-methionine-dependent methyltransferase | SAMEA3752372_05648 | Not Available | Negative | 5629992 - 5630714 | 27226.7 |
| hydroxyacylglutathione hydrolase | SAMEA3752372_05649 | Not Available | Positive | 5630748 - 5631503 | 28461.0 |
| membrane-bound lytic murein transglycosylase d | SAMEA3752372_05650 | Not Available | Positive | 5631713 - 5632933 | 44680.6 |
| putative methyltransferase | SAMEA3752372_05651 | Not Available | Negative | 5632980 - 5633750 | 28245.3 |
| endonuclease/exonuclease/phosphatase family protein | SAMEA3752372_05652 | Not Available | Negative | 5633827 - 5634606 | 29128.3 |
| lysr family transcriptional regulator | SAMEA3752372_05653 | Not Available | Positive | 5634868 - 5635782 | 33768.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





