Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance protein | SAMEA3752372_05633 | Not Available | Positive | 5616062 - 5617294 | 44612.1 |
| inner membrane protein | SAMEA3752372_05634 | Not Available | Positive | 5617335 - 5618615 | 48094.4 |
| 2-hydroxyglutaryl-coa dehydratase | SAMEA3752372_05635 | Not Available | Positive | 5618731 - 5619882 | 42799.3 |
| atpase, activator of (r)-hydroxyglutaryl-coa dehydratase | SAMEA3752372_05636 | Not Available | Positive | 5619892 - 5620659 | 27142.7 |
| protein of uncharacterised function (duf3343) | SAMEA3752372_05637 | Not Available | Positive | 5620656 - 5620922 | 9923.93 |
| pentapeptide repeat-containing protein | SAMEA3752372_05638 | Not Available | Positive | 5621232 - 5622464 | 47027.6 |
| uncharacterised protein | SAMEA3752372_05639 | Not Available | Positive | 5622842 - 5623087 | 8783.36 |
| protein of avirulence locus involved in temperature-dependent protein secretion | SAMEA3752372_05640 | Not Available | Positive | 5623122 - 5623952 | 30640.1 |
| type vi secretion system lysozyme-like protein | SAMEA3752372_05641 | Not Available | Positive | 5623949 - 5624443 | 18965.7 |
| putative type vi secretion system protein | SAMEA3752372_05643 | Not Available | Positive | 5626339 - 5627334 | 37456.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





