Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted transcriptional regulators containing the copg/arc/metj dna-binding domain | SAMEA3752372_05569 | Not Available | Positive | 5553723 - 5555042 | 49343.2 |
| uncharacterised protein | SAMEA3752372_05570 | Not Available | Positive | 5555055 - 5555258 | 7300.92 |
| atp/gtp-binding protein | SAMEA3752372_05571 | Not Available | Negative | 5555322 - 5556527 | 45287.0 |
| protein ydia | SAMEA3752372_05572 | Not Available | Negative | 5556524 - 5557342 | 30649.6 |
| membrane-bound atp synthase | SAMEA3752372_05574 | Not Available | Negative | 5557640 - 5558059 | 15069.2 |
| atp synthase subunit beta | SAMEA3752372_05575 | Not Available | Negative | 5558080 - 5559462 | 50328.5 |
| membrane-bound atp synthase f1 sector gamma-subunit | SAMEA3752372_05576 | Not Available | Negative | 5559489 - 5560352 | 31579.3 |
| atp synthase subunit alpha | SAMEA3752372_05577 | Not Available | Negative | 5560403 - 5561944 | 55225.4 |
| atp synthase subunit delta | SAMEA3752372_05578 | Not Available | Negative | 5561957 - 5562490 | 19333.3 |
| membrane-bound atp synthase f0 sector subunit b | SAMEA3752372_05579 | Not Available | Negative | 5562505 - 5562975 | 17264.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





