Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion-associated chaperone | SAMEA3752372_05549 | Not Available | Positive | 5538022 - 5538513 | 18925.9 |
| putative invasion genes regulator | SAMEA3752372_05550 | Not Available | Positive | 5538848 - 5539894 | 40119.9 |
| transposon tn21 resolvase | SAMEA3752372_05551 | Not Available | Positive | 5540281 - 5540841 | 21288.5 |
| relaxase | SAMEA3752372_05552 | Not Available | Positive | 5540845 - 5541441 | 22543.9 |
| tetracycline repressor protein | SAMEA3752372_05553 | Not Available | Negative | 5541473 - 5542150 | 24416.0 |
| tetracycline efflux protein | SAMEA3752372_05554 | Not Available | Positive | 5542229 - 5543428 | 42243.5 |
| drug/metabolite transporter | SAMEA3752372_05555 | Not Available | Negative | 5543460 - 5544344 | 31150.6 |
| putative transposase | SAMEA3752372_05556 | Not Available | Positive | 5544833 - 5546629 | 67388.6 |
| uncharacterised protein | SAMEA3752372_05557 | Not Available | Positive | 5546739 - 5547089 | 13800.1 |
| uncharacterised protein | SAMEA3752372_05558 | Not Available | Positive | 5547256 - 5547783 | 20321.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





