Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer system protein | SAMEA3752372_05526 | Not Available | Negative | 5516933 - 5517595 | 25731.0 |
| uncharacterised protein | SAMEA3752372_05527 | Not Available | Negative | 5517582 - 5518691 | 42600.0 |
| conjugative coupling factor | SAMEA3752372_05528 | Not Available | Negative | 5518691 - 5520775 | 78142.3 |
| conjugative transfer system protein | SAMEA3752372_05529 | Not Available | Negative | 5520775 - 5522115 | 49392.4 |
| galactose operon repressor | SAMEA3752372_05533 | Not Available | Positive | 5523114 - 5524145 | 37122.3 |
| diaminopimelate decarboxylase | SAMEA3752372_05534 | Not Available | Negative | 5524152 - 5525414 | 46178.1 |
| lysr family transcriptional regulator | SAMEA3752372_05535 | Not Available | Positive | 5525536 - 5526471 | 34410.7 |
| putative asp/glu/hydantoin racemase | SAMEA3752372_05536 | Not Available | Negative | 5526458 - 5527150 | 25406.7 |
| arabinose-proton symporter | SAMEA3752372_05537 | Not Available | Negative | 5527279 - 5528697 | 51687.6 |
| 2-keto-3-deoxygluconate oxidoreductase | SAMEA3752372_05538 | Not Available | Negative | 5529012 - 5529773 | 27042.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





