Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Replication protein repl | SAMEA3752372_04240 | Not Available | Negative | 4298566 - 4299528 | 35928.7 |
| Putative head processing protein | SAMEA3752372_04241 | Not Available | Negative | 4299729 - 4300727 | 37250.2 |
| Putative portal protein prt | SAMEA3752372_04242 | Not Available | Negative | 4300741 - 4302423 | 61594.9 |
| Ddrb | SAMEA3752372_04243 | Not Available | Negative | 4302488 - 4303873 | 50108.8 |
| Ddra | SAMEA3752372_04244 | Not Available | Negative | 4303968 - 4304336 | 13280.2 |
| Dara | SAMEA3752372_04245 | Not Available | Negative | 4304336 - 4306267 | 70870.9 |
| Hdf | SAMEA3752372_04246 | Not Available | Negative | 4306260 - 4306880 | 22593.1 |
| Lysis determining protein lydb | SAMEA3752372_04247 | Not Available | Negative | 4306870 - 4307316 | 17282.9 |
| Lysis determining protein lyda | SAMEA3752372_04248 | Not Available | Negative | 4307316 - 4307642 | 11099.5 |
| Cin | SAMEA3752372_04249 | Not Available | Positive | 4307747 - 4308112 | 13306.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





