Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nad(p)h oxidoreductase | SAMEA3752372_05264 | Not Available | Negative | 5291582 - 5292154 | 21287.5 |
| amidohydrolase family protein | SAMEA3752372_05265 | Not Available | Negative | 5292360 - 5292896 | 20210.7 |
| putative tas protein | SAMEA3752372_05266 | Not Available | Negative | 5293087 - 5294034 | 34214.0 |
| chaperone protein hcha | SAMEA3752372_05267 | Not Available | Negative | 5294108 - 5294797 | 24772.1 |
| uncharacterised protein | SAMEA3752372_05268 | Not Available | Negative | 5294806 - 5295114 | 11512.9 |
| putative lysr-family transcriptional regulator | SAMEA3752372_05269 | Not Available | Positive | 5295254 - 5295625 | 13859.8 |
| putative lysr-family transcriptional regulator | SAMEA3752372_05270 | Not Available | Positive | 5295653 - 5296153 | 18994.2 |
| uncharacterised protein | SAMEA3752372_05271 | Not Available | Positive | 5297113 - 5298357 | 46740.2 |
| uncharacterised protein | SAMEA3752372_05272 | Not Available | Positive | 5298350 - 5299105 | 28689.3 |
| cp4-44 prophage | SAMEA3752372_05273 | Not Available | Positive | 5299071 - 5301128 | 77079.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





