Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine dipeptidase | SAMEA3752372_05159 | Not Available | Positive | 5191565 - 5192146 | 21242.2 |
| abc transporter substrate-binding protein | SAMEA3752372_05160 | Not Available | Positive | 5192160 - 5193710 | 57702.3 |
| abc transporter permease | SAMEA3752372_05161 | Not Available | Positive | 5193712 - 5194734 | 37398.4 |
| abc transporter permease | SAMEA3752372_05162 | Not Available | Positive | 5194731 - 5195627 | 31990.9 |
| d-ala-d-ala transporter subunit ddpd | SAMEA3752372_05163 | Not Available | Positive | 5195624 - 5196610 | 36076.1 |
| abc transporter atp-binding protein | SAMEA3752372_05164 | Not Available | Positive | 5196603 - 5197529 | 34615.0 |
| peroxiredoxin (osmotically-inducible protein c) | SAMEA3752372_05165 | Not Available | Negative | 5197585 - 5198016 | 15089.0 |
| biofilm-dependent modulation protein | SAMEA3752372_05166 | Not Available | Positive | 5198361 - 5198576 | 7988.24 |
| 30s ribosomal subunit s22 | SAMEA3752372_05167 | Not Available | Positive | 5198678 - 5198815 | 5096.13 |
| malate dehydrogenase | SAMEA3752372_05168 | Not Available | Positive | 5198972 - 5200669 | 63176.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





