Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein d | SAMEA3752372_05149 | Not Available | Positive | 5172755 - 5173684 | 33850.4 |
| sensor protein pcos | SAMEA3752372_05150 | Not Available | Positive | 5173739 - 5175832 | 78632.8 |
| pcoe | SAMEA3752372_05151 | Not Available | Positive | 5176050 - 5176484 | 15647.5 |
| tonb-dependent receptor | SAMEA3752372_05152 | Not Available | Positive | 5177010 - 5179373 | 88428.4 |
| membrane-associated peptidase | SAMEA3752372_05153 | Not Available | Positive | 5179438 - 5182221 | 104110.0 |
| glutamate decarboxylase beta | SAMEA3752372_05154 | Not Available | Positive | 5182583 - 5183983 | 52671.0 |
| glutamate/gamma-aminobutyrate antiporter (extreme acid sensitivity protein) | SAMEA3752372_05155 | Not Available | Positive | 5184139 - 5185674 | 55064.0 |
| putative lipoprotein | SAMEA3752372_05156 | Not Available | Positive | 5185805 - 5187124 | 49646.9 |
| putative signal transduction protein | SAMEA3752372_05157 | Not Available | Positive | 5187501 - 5188883 | 53172.7 |
| heme-regulated cyclic amp phosphodiesterase (direct oxygen sensor protein) | SAMEA3752372_05158 | Not Available | Positive | 5188908 - 5191307 | 90267.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





