Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein thic | SAMEA3752372_05085 | Not Available | Negative | 5094308 - 5096203 | 70823.3 |
| regulator of sigma d | SAMEA3752372_05087 | Not Available | Negative | 5096436 - 5096912 | 18243.9 |
| nadh pyrophosphatase | SAMEA3752372_05088 | Not Available | Positive | 5097007 - 5097780 | 29704.6 |
| uroporphyrinogen decarboxylase | SAMEA3752372_05089 | Not Available | Positive | 5097820 - 5098884 | 39250.4 |
| endonuclease v | SAMEA3752372_05090 | Not Available | Positive | 5099041 - 5099712 | 24673.9 |
| protein of uncharacterised function (duf416) | SAMEA3752372_05091 | Not Available | Positive | 5099755 - 5100345 | 22581.8 |
| dna-binding protein hu-alpha | SAMEA3752372_05092 | Not Available | Positive | 5100532 - 5100804 | 9535.51 |
| membrane protein | SAMEA3752372_05093 | Not Available | Positive | 5100877 - 5101512 | 24031.1 |
| zinc resistance protein | SAMEA3752372_05094 | Not Available | Negative | 5101514 - 5101939 | 15253.4 |
| sensor protein zras | SAMEA3752372_05095 | Not Available | Positive | 5102177 - 5103553 | 50548.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





