Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| usher protein | SAMEA3752372_05052 | Not Available | Positive | 5061245 - 5063767 | 91185.4 |
| outer membrane protein | SAMEA3752372_05053 | Not Available | Positive | 5063783 - 5065117 | 46782.9 |
| pili assembly chaperone | SAMEA3752372_05054 | Not Available | Positive | 5065114 - 5065803 | 25753.9 |
| oxidoreductase | SAMEA3752372_05055 | Not Available | Negative | 5065949 - 5066731 | 28554.5 |
| transcriptional regulator | SAMEA3752372_05056 | Not Available | Positive | 5067417 - 5068238 | 31343.8 |
| fidl-like protein | SAMEA3752372_05057 | Not Available | Positive | 5068243 - 5068734 | 18968.6 |
| rtn-like protein | SAMEA3752372_05058 | Not Available | Negative | 5068836 - 5070446 | 60913.4 |
| putative diguanylate cyclase | SAMEA3752372_05059 | Not Available | Negative | 5070544 - 5071902 | 51718.4 |
| outer membrane protein pgaa | SAMEA3752372_05060 | Not Available | Positive | 5072493 - 5072723 | 8285.82 |
| udp-n-acetylenolpyruvoylglucosamine reductase | SAMEA3752372_05063 | Not Available | Positive | 5073081 - 5074109 | 37888.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





