Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Pdca | SAMEA3752372_04207 | Not Available | Positive | 4272873 - 4273070 | 7361.29 |
| Insertion-associated protein | SAMEA3752372_04208 | Not Available | Negative | 4273103 - 4273879 | 28783.3 |
| Hypothetical protein | SAMEA3752372_04209 | Not Available | Negative | 4273886 - 4274548 | 24225.9 |
| Deoxyuridine 5'-triphosphate nucleotide hydrolase | SAMEA3752372_04210 | Not Available | Negative | 4274563 - 4275057 | 17887.7 |
| uncharacterised protein | SAMEA3752372_04211 | Not Available | Negative | 4275054 - 4275530 | 17970.7 |
| uncharacterised protein | SAMEA3752372_04212 | Not Available | Negative | 4275527 - 4275871 | 12913.5 |
| Gst-loxp-cre recombinase fusion protein | SAMEA3752372_04213 | Not Available | Negative | 4275945 - 4276973 | 38849.9 |
| uncharacterised protein | SAMEA3752372_04214 | Not Available | Positive | 4277368 - 4278405 | 39679.4 |
| Putative large terminase protein | SAMEA3752372_04215 | Not Available | Negative | 4278433 - 4279941 | 57099.0 |
| Terminase a protein | SAMEA3752372_04216 | Not Available | Negative | 4279941 - 4281305 | 51050.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





