Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| resolvase transposon tn3 | SAMEA3752372_04999 | Not Available | Positive | 5001499 - 5002056 | 20604.8 |
| beta-lactamase tem | SAMEA3752372_05000 | Not Available | Positive | 5002239 - 5003099 | 31517.0 |
| inner membrane protein | SAMEA3752372_05002 | Not Available | Positive | 5004497 - 5004802 | 9447.98 |
| outer membrane lipoprotein | SAMEA3752372_05003 | Not Available | Positive | 5004909 - 5005553 | 24225.9 |
| group 4 capsule (g4c) polysaccharide, ymcb | SAMEA3752372_05004 | Not Available | Positive | 5005550 - 5006296 | 27355.7 |
| putative lipoprotein | SAMEA3752372_05005 | Not Available | Positive | 5006296 - 5008392 | 78675.2 |
| polysaccharide export protein | SAMEA3752372_05006 | Not Available | Positive | 5008417 - 5009577 | 42607.2 |
| phosphotyrosine-protein phosphatase | SAMEA3752372_05007 | Not Available | Positive | 5009565 - 5010011 | 16386.9 |
| cryptic autophosphorylating protein tyrosine kinase etk | SAMEA3752372_05008 | Not Available | Positive | 5010031 - 5012211 | 81264.5 |
| periplasmic appa protein | SAMEA3752372_05009 | Not Available | Negative | 5012331 - 5013629 | 47146.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





