Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilr protein | SAMEA3752372_04620 | Not Available | Positive | 4662095 - 4663180 | 40620.7 |
| pils domain-containing protein | SAMEA3752372_04621 | Not Available | Positive | 4663197 - 4663811 | 21244.3 |
| lytic transglycosylase | SAMEA3752372_04622 | Not Available | Positive | 4663821 - 4664381 | 20823.6 |
| inci1 conjugal transfer prepilin peptidase pilu | SAMEA3752372_04623 | Not Available | Positive | 4664366 - 4665022 | 24566.9 |
| pre-pilin pilv | SAMEA3752372_04624 | Not Available | Positive | 4665022 - 4666314 | 45744.8 |
| uncharacterised protein | SAMEA3752372_04625 | Not Available | Negative | 4666732 - 4666866 | 5173.68 |
| uncharacterised protein | SAMEA3752372_04626 | Not Available | Negative | 4667955 - 4668053 | 3407.34 |
| shufflon-specific dna recombinase | SAMEA3752372_04627 | Not Available | Positive | 4668080 - 4669234 | 44230.6 |
| protein trae | SAMEA3752372_04628 | Not Available | Positive | 4669385 - 4670209 | 30946.3 |
| f pilus assembly | SAMEA3752372_04629 | Not Available | Positive | 4670295 - 4671497 | 43182.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





