Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3752372_04578 | Not Available | Negative | 4623535 - 4623705 | 6616.63 |
| toxin of the hica-hicb toxin-antitoxin system | SAMEA3752372_04579 | Not Available | Positive | 4623987 - 4624163 | 6782.3 |
| putative transcriptional regulator | SAMEA3752372_04580 | Not Available | Positive | 4624188 - 4624625 | 16146.6 |
| transcriptional regulator protein ydcr | SAMEA3752372_04581 | Not Available | Positive | 4624704 - 4626110 | 52748.8 |
| abc transporter substrate-binding protein | SAMEA3752372_04582 | Not Available | Positive | 4626355 - 4627500 | 42325.4 |
| abc transporter atp-binding protein | SAMEA3752372_04583 | Not Available | Positive | 4627518 - 4628531 | 37033.9 |
| abc transporter permease | SAMEA3752372_04584 | Not Available | Positive | 4628532 - 4629473 | 34367.1 |
| transporter permease | SAMEA3752372_04585 | Not Available | Positive | 4629463 - 4630257 | 28683.5 |
| gamma-aminobutyraldehyde dehydrogenase | SAMEA3752372_04586 | Not Available | Positive | 4630279 - 4631703 | 50830.9 |
| putative transferase | SAMEA3752372_04587 | Not Available | Positive | 4631926 - 4632735 | 31112.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





